Doctor Who
Alfava Metraxis Beach
The TARDIS lands on this beach below the crashed spaceship in episode 5x04 “The Time of Angels”.
Source: The Doctor Who Locations Guide
Power Generators
The Doctor, Rory, and Rory's dad are teleported to the spaceships power generation room in episode 7x02 “Dinosaurs on a Spaceship”.
Source: The Doctor Who Locations Guide
Cumbria, 1207
While waiting for information on Clara, the Doctor is staying in a monastery in episode 7x06 “The Bells of Saint John”.
Source: The Doctor Who Locations Guide
Bad Wolf Bay, Norway
Rose remembers his time with the Doctor in episode 2x12 “Army of Ghosts”. Rose and the Doctor say goodbye on the beach in episode 2x13 “Doomsday”. Rose says goodbye to the Doctor once again in episode 4x13 “Journey's End”.
Source: The Doctor Who Locations Guide
Alien Landscape
Rose thinks back to visiting an alien landscape with the Doctor in episode 2x12 “Army of Ghosts”.
Source: The Doctor Who Locations Guide